BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G11LP1|AL429632
(485 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1426 784 0.0
>3x_Contig1426
Length = 8319
Score = 784 bits (394), Expect = 0.0
Identities = 403/407 (99%)
Strand = Plus / Minus
Query: 2 ccaccggatatcactgagaaaaatcattttttaagtgatatgtctctaagatggattctc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6083 ccaccggatatcactgagaaaaatcattttttaagtgatatgtctctaagatggattctc 6024
Query: 62 tcagaagcgatcaaatccggagtactttttaaaaaaggaatcatccatgaatttgctggc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6023 tcagaagcgatcaaatccggagtactttttaaaaaaggaatcatccatgaatttgctggc 5964
Query: 122 aaatatacatctgctggaagcttattgtcagcatcgcacgatcttttgagtttcaaaaag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5963 aaatatacatctgctggaagcttattgtcagcatcgcacgatcttttgagtttcaaaaag 5904
Query: 182 agcaatcttactatgaaaaacccatttcacaaaaaagagactaatgaatatgatgaagat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 agcaatcttactatgaaaaacccatttcacaaaaaagagactaatgaatatgatgaagat 5844
Query: 242 caaattaatagataccacggcttcaaactgccatcaaagagaagttggttaccgtggcgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843 caaattaatagataccacggcttcaaactgccatcaaagagaagttggttaccgtggcgt 5784
Query: 302 cataaaacagagaacgtttacttcagaacgtttaactggaaaacggaatcaccatctagt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5783 cataaaacagagaacgtttacttcagaacgtttaactggaaaacggaatcaccatctagt 5724
Query: 362 tgttctgatcttgagcaaggttttgatantgatgaaaamgggaagga 408
|||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5723 tgttctgatcttgagcaaggttttgatactgatgaaccagggaagga 5677
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3554
Number of Sequences: 1807
Number of extensions: 3554
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 485
length of database: 10,358,551
effective HSP length: 16
effective length of query: 469
effective length of database: 10,329,639
effective search space: 4844600691
effective search space used: 4844600691
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)